STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIGNFidgetin, microtubule severing factor; Belongs to the AAA ATPase family. (784 aa)    
Predicted Functional Partners:
UBXN7
UBX domain-containing protein 7.
   
 0.928
IST1
IST1 factor associated with ESCRT-III.
    
 0.758
YOD1
YOD1 deubiquitinase.
   
 0.747
U3HZV8_ANAPP
Uncharacterized protein.
   
 0.702
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
    
 0.674
NAPB
NSF attachment protein beta.
    
 0.670
PHTF2
Putative homeodomain transcription factor 2.
   
 0.641
ZFAND4
Zinc finger AN1-type containing 4.
    
 0.628
ZNF703
Zinc finger protein 703.
      
 0.611
ZFYVE26
Zinc finger FYVE-type containing 26.
      
 0.602
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.