STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPN13KIND domain-containing protein. (231 aa)    
Predicted Functional Partners:
PTPN20
Protein tyrosine phosphatase non-receptor type 20.
 
  
 0.909
ENSAPLP00000028145
Uncharacterized protein.
 
      0.899
PTPRA
Uncharacterized protein.
 
  
 
 0.864
PTPN2
Tyrosine-protein phosphatase non-receptor type.
 
  
 0.802
PTPRO
Uncharacterized protein.
 
 
   0.772
PTPN1
Tyrosine-protein phosphatase non-receptor type.
 
  
 0.770
COL14A1
Collagen type XIV alpha 1 chain.
     
 0.716
RAPGEF2
Rap guanine nucleotide exchange factor 2.
    
 
 0.611
GAB1
GRB2 associated binding protein 1.
    
 0.577
RAPGEF6
Uncharacterized protein.
    
 0.571
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.