STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPACA6Ig-like domain-containing protein. (303 aa)    
Predicted Functional Partners:
SNRPG
Small nuclear ribonucleoprotein polypeptide G.
   
 0.996
SNRPD3
Small nuclear ribonucleoprotein Sm D3.
   
 0.996
SNRPD1
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
   
 0.996
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
   
 0.996
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
   
 0.988
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
   
 0.984
SF3B4
Splicing factor 3b subunit 4.
    
 0.984
SNRNP35
Small nuclear ribonucleoprotein U11/U12 subunit 35.
    
 0.983
SF3B3
Splicing factor 3b subunit 3.
   
 0.982
PRPF8
Pre-mRNA processing factor 8.
   
 0.982
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.