STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAHD2AFumarylacetoacetate hydrolase domain containing 2A. (294 aa)    
Predicted Functional Partners:
CFAP20
Cilia and flagella associated protein 20.
      
 0.943
HGD
Homogentisate 1,2-dioxygenase.
  
 
 0.767
HMGCLL1
3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1.
  
 
 0.657
ARL2BP
ADP ribosylation factor like GTPase 2 binding protein.
      
 0.621
TBC1D32
TBC1 domain family member 32.
      
 0.612
ALDH7A1
Aldehyde dehydrogenase 7 family member A1; Belongs to the aldehyde dehydrogenase family.
  
 0.552
MARS1
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.519
GTF2H2
General transcription factor IIH subunit.
 
      0.516
U3IDF5_ANAPP
Uncharacterized protein; Belongs to the GST superfamily.
  
 
 0.488
GSTZ1
Glutathione S-transferase zeta 1; Belongs to the GST superfamily.
  
 
 0.488
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.