STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DOCK11Dedicator of cytokinesis 11; Belongs to the DOCK family. (2070 aa)    
Predicted Functional Partners:
CDC42
Cell division cycle 42.
   
 0.816
U3IPR8_ANAPP
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
      
 0.611
U3ICX4_ANAPP
Uncharacterized protein; Belongs to the DEAD box helicase family.
      
 0.610
RRP9
Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.
      
 0.610
DDX27
DEAD-box helicase 27; Belongs to the DEAD box helicase family.
      
 0.586
KCNRG
Potassium channel regulator.
      
 0.586
RAC1
Rac family small GTPase 1.
   
 0.523
RAC3
Rac family small GTPase 3.
   
 0.523
RAC2
Rac family small GTPase 2.
   
 0.523
RFX8
RFX family member 8, lacking RFX DNA binding domain.
      
 0.522
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.