STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC22CSEC22 homolog C, vesicle trafficking protein; Belongs to the synaptobrevin family. (304 aa)    
Predicted Functional Partners:
BET1
t-SNARE coiled-coil homology domain-containing protein.
   
 0.916
ENSAPLP00000028388
Uncharacterized protein.
    
 0.915
SCFD1
Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.873
NAPB
NSF attachment protein beta.
   
 0.866
STX18
Syntaxin 18.
   
 0.853
FAM163B
Family with sequence similarity 163 member B.
      
 0.850
ZC2HC1B
Uncharacterized protein.
      
 0.850
RINT1
RAD50 interactor 1.
    
 0.840
SEC24B
SEC24 homolog B, COPII coat complex component.
    
 0.823
SEC24A
Uncharacterized protein.
    
 0.823
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.