STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUBTUB bipartite transcription factor; Belongs to the TUB family. (583 aa)    
Predicted Functional Partners:
ETNK2
Ethanolamine kinase 2.
    
 
 0.678
TTC21B
Tetratricopeptide repeat domain 21B.
    
 0.678
ETNK1
Ethanolamine kinase 1.
    
 
 0.646
IFT140
Intraflagellar transport 140.
    
 0.633
IFT122
Intraflagellar transport 122.
    
 0.627
WDR19
WD repeat domain 19.
    
 0.617
ARL13B
ADP ribosylation factor like GTPase 13B.
   
  
 0.611
WDR35
WD repeat domain 35.
    
 0.585
NDUFS3
NADH:ubiquinone oxidoreductase core subunit S3; Belongs to the complex I 30 kDa subunit family.
      
 0.539
RNH1
Ribonuclease/angiogenin inhibitor 1.
    
 
 0.517
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.