STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN13Tetraspanin 13; Belongs to the tetraspanin (TM4SF) family. (203 aa)    
Predicted Functional Partners:
FRMD7
FERM domain containing 7.
      
 0.679
ANKMY2
Ankyrin repeat and MYND domain containing 2.
      
 0.622
FOXA1
Forkhead box A1.
      
 0.619
TSPAN5
Tetraspanin.
      
 0.609
BZW2
Basic leucine zipper and W2 domains 2.
 
    
 0.603
C3orf14
Chromosome 3 open reading frame 14.
      
 0.586
OTULINL
OTU deubiquitinase with linear linkage specificity like.
      
 0.586
TTC1
Tetratricopeptide repeat domain 1.
      
 0.548
ACBD7
Acyl-CoA binding domain containing 7.
      
 0.501
CHIC1
Cysteine rich hydrophobic domain 1.
      
 0.473
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.