STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB35RAB35, member RAS oncogene family. (204 aa)    
Predicted Functional Partners:
DENND1A
DENN domain containing 1A.
    
 0.962
DENND1B
DENN domain containing 1B.
    
 0.949
ENSAPLP00000022243
Uncharacterized protein.
    
 
 0.889
ENSAPLP00000028201
Rab-GAP TBC domain-containing protein.
   
 0.886
GDI2
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
    
 0.860
RUSC2
RUN and SH3 domain containing 2.
    
 
 0.804
IFT88
Intraflagellar transport 88.
    
 0.799
IFT52
Intraflagellar transport 52.
    
 0.792
IFT22
Intraflagellar transport 22.
    
 0.792
HSPB11
Heat shock protein family B (small) member 11.
    
 0.791
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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