STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM19A1Uncharacterized protein. (208 aa)    
Predicted Functional Partners:
FAM163A
Family with sequence similarity 163 member A.
      
 0.621
GPR1
G protein-coupled receptor 1; Belongs to the G-protein coupled receptor 1 family.
      
 0.609
MAMDC2
MAM domain containing 2.
      
 0.603
LDB2
LIM domain binding 2.
      
 0.602
EOGT
EGF domain specific O-linked N-acetylglucosamine transferase.
 
  
 
 0.552
SHISA3
Shisa family member 3.
      
 0.551
FRMD4B
FERM domain containing 4B.
      
 0.546
ARL6IP5
PRA1 family protein.
      
 0.546
LAYN
Layilin.
      
 0.541
HINFP
Histone H4 transcription factor.
      
 0.541
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.