STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAPGEF2Rap guanine nucleotide exchange factor 2. (1657 aa)    
Predicted Functional Partners:
RAP1B
RAP1B, member of RAS oncogene family.
   
 0.776
RAP1A
Uncharacterized protein.
   
 0.776
PTPN13
KIND domain-containing protein.
    
 
 0.611
ENSAPLP00000028145
Uncharacterized protein.
    
 
 0.611
MRAS
Muscle RAS oncogene homolog.
   
 0.554
IQSEC3
SEC7 domain-containing protein.
      
 0.551
RAPGEF6
Uncharacterized protein.
  
 
0.540
ZDHHC17
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.521
DIRAS3
Uncharacterized protein.
   
 0.514
RAP2C
RAP2C, member of RAS oncogene family.
   
 0.514
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.