STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTF2IUncharacterized protein. (167 aa)    
Predicted Functional Partners:
NCF1
Neutrophil cytosolic factor 1.
 
    
 0.657
LINGO2
Leucine rich repeat and Ig domain containing 2.
      
 0.632
TMC3
Transmembrane channel-like protein.
    
 
 0.631
MTHFSD
Methenyltetrahydrofolate synthetase domain containing.
      
 0.611
BMX
Tyrosine-protein kinase.
    
 
 0.588
HDAC3
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 
 0.563
AGK
Acylglycerol kinase.
      
 0.483
GLI2
Uncharacterized protein.
    
 
 0.455
PRKN
Parkin RBR E3 ubiquitin protein ligase.
      
 0.450
USP6NL
USP6 N-terminal like.
   
  
 0.442
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.