STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DBX1Developing brain homeobox 1. (422 aa)    
Predicted Functional Partners:
TCF7L2
Transcription factor 7 like 2.
     
 0.639
IRX3
Iroquois homeobox 3.
    
 
 0.618
LHX2
LIM homeobox 2.
    
 
 0.616
OLIG2
Oligodendrocyte transcription factor 2.
   
  
 0.615
OLIG3
Oligodendrocyte transcription factor 3.
   
  
 0.615
SHH
Sonic hedgehog signaling molecule.
      
 0.613
GATA3
GATA binding protein 3.
    
 
 0.612
SIM1
SIM bHLH transcription factor 1.
   
  
 0.612
LHX9
LIM homeobox 9.
    
 
 0.610
SLC17A6
Solute carrier family 17 member 6.
      
 0.586
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.