STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AUTS2Activator of transcription and developmental regulator AUTS2. (1099 aa)    
Predicted Functional Partners:
PCGF5
Polycomb group ring finger 5.
    
 0.930
PCGF3
Polycomb group ring finger 3.
    
 0.896
PCGF6
Polycomb group ring finger 6.
    
 0.792
CHEK2
Checkpoint kinase 2.
   
 0.728
NPAS3
Neuronal PAS domain protein 3.
      
 0.728
CHEK1
Checkpoint kinase 1.
   
 0.714
PCGF1
Polycomb group ring finger 1.
    
 0.702
BCL11A
BAF chromatin remodeling complex subunit BCL11A.
      
 0.677
CCNE1
Cyclin E1; Belongs to the cyclin family.
   
 0.626
YAF2
YY1 associated factor 2.
    
 0.605
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.