STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SQSTM1Uncharacterized protein. (77 aa)    
Predicted Functional Partners:
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.989
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.987
NBR1
NBR1 autophagy cargo receptor.
    
 0.969
RIPK1
Receptor interacting serine/threonine kinase 1.
   
 0.965
TBK1
TANK binding kinase 1.
    
 0.958
ATM
Non-specific serine/threonine protein kinase.
     
 0.957
VDAC1
Voltage dependent anion channel 1.
   
 0.949
KLHL17
Kelch like family member 17.
    
 0.935
ENSAPLP00000023897
Uncharacterized protein.
   
 0.929
MAP3K3
Mitogen-activated protein kinase kinase kinase 3.
    
 0.921
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.