STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLINT1Clathrin interactor 1. (654 aa)    
Predicted Functional Partners:
GAK
Cyclin G associated kinase.
    
 0.982
VTI1B
Vesicle transport through interaction with t-SNAREs 1B.
    
 
 0.916
PUM1
Pumilio RNA binding family member 1.
   
 
 0.900
SH3D19
SH3 domain containing 19.
     
 0.887
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
    
 
 0.711
CLTA
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
 0.704
DNAJC6
DnaJ heat shock protein family (Hsp40) member C6.
    
 0.658
PUM2
Pumilio RNA binding family member 2.
   
 
 0.644
TBC1D2
TBC1 domain family member 2.
      
 0.611
MARF1
Meiosis regulator and mRNA stability factor 1.
      
 0.586
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.