Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CXCR5 | N4BP3 | ENSAPLP00000000175 | ENSAPLP00000028273 | C-X-C motif chemokine receptor 5; Belongs to the G-protein coupled receptor 1 family. | NEDD4 binding protein 3. | 0.403 |
CXCR5 | TMEM200B | ENSAPLP00000000175 | ENSAPLP00000022594 | C-X-C motif chemokine receptor 5; Belongs to the G-protein coupled receptor 1 family. | Transmembrane protein 200B. | 0.451 |
N4BP3 | CXCR5 | ENSAPLP00000028273 | ENSAPLP00000000175 | NEDD4 binding protein 3. | C-X-C motif chemokine receptor 5; Belongs to the G-protein coupled receptor 1 family. | 0.403 |
N4BP3 | TMEM200B | ENSAPLP00000028273 | ENSAPLP00000022594 | NEDD4 binding protein 3. | Transmembrane protein 200B. | 0.421 |
TMEM200B | CXCR5 | ENSAPLP00000022594 | ENSAPLP00000000175 | Transmembrane protein 200B. | C-X-C motif chemokine receptor 5; Belongs to the G-protein coupled receptor 1 family. | 0.451 |
TMEM200B | N4BP3 | ENSAPLP00000022594 | ENSAPLP00000028273 | Transmembrane protein 200B. | NEDD4 binding protein 3. | 0.421 |