STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATRIPATR interacting protein. (1045 aa)    
Predicted Functional Partners:
ATR
Uncharacterized protein.
    
 0.997
FANCM
FA complementation group M.
     
 0.994
ENSAPLP00000032945
Uncharacterized protein.
    
 0.988
U3I2H1_ANAPP
Uncharacterized protein.
     
 0.961
TOPBP1
DNA topoisomerase II binding protein 1.
    
 0.953
RPA1
Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.
    
 0.939
SLF1
SMC5-SMC6 complex localization factor 1.
    
 0.936
BRCA1
BRCA1 DNA repair associated.
    
 0.913
RAD17
RAD17 checkpoint clamp loader component.
    
 0.893
RAD9A
RAD9 checkpoint clamp component A.
     
 0.882
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.