STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCTD7Potassium channel tetramerization domain containing 7. (521 aa)    
Predicted Functional Partners:
RABGEF1
Uncharacterized protein.
 
   
  0.820
ASB1
Ankyrin repeat and SOCS box containing 1.
     
 0.612
DRG2
Developmentally regulated GTP binding protein 2.
      
 0.611
VPS53
VPS53 subunit of GARP complex.
      
 0.611
PNPO
Pyridoxamine 5'-phosphate oxidase.
      
 0.611
APBA2
Amyloid beta precursor protein binding family A member 2.
      
 0.611
TBL2
Transducin beta like 2.
      
 0.610
CNOT4
CCR4-NOT transcription complex subunit 4.
      
 0.602
NUP54
Nucleoporin 54.
   
  
 0.596
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.595
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.