STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCAMP1Secretory carrier-associated membrane protein. (339 aa)    
Predicted Functional Partners:
ST8SIA2
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2; Belongs to the glycosyltransferase 29 family.
      
 0.479
SNPH
Syntaphilin.
      
 0.477
ZCCHC4
Zinc finger CCHC-type containing 4.
      
 0.475
ZBTB8OS
Zinc finger and BTB domain containing 8 opposite strand.
      
 0.475
EAPP
E2F associated phosphoprotein.
      
 0.471
DRG2
Developmentally regulated GTP binding protein 2.
   
  
 0.437
THUMPD2
THUMP domain containing 2.
      
 0.430
MLEC
Malectin.
      
 0.430
GPBP1
GC-rich promoter binding protein 1.
      
 0.429
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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