STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB10RAB10, member RAS oncogene family. (200 aa)    
Predicted Functional Partners:
U3IGE9_ANAPP
Uncharacterized protein.
  
  
 
0.903
GDI2
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 0.834
RAB3IP
Sec2p domain-containing protein.
    
 0.718
RAB3IL1
RAB3A interacting protein like 1.
    
 0.704
RILPL2
Rab interacting lysosomal protein like 2.
    
 
 0.687
RILPL1
Rab interacting lysosomal protein like 1.
    
 0.682
RAB1A
RAB1A, member RAS oncogene family.
  
 
0.666
EHBP1
EH domain binding protein 1.
    
 0.661
CHM
Uncharacterized protein.
    
 0.661
EXOC5
Exocyst complex component 5.
 
 
 0.643
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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