STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPRMProtein tyrosine phosphatase receptor type M. (1498 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
    
 0.917
CTNND1
Uncharacterized protein.
   
  0.902
PPFIA4
PTPRF interacting protein alpha 4.
    
 0.692
FAM160A1
Family with sequence similarity 160 member A1.
      
 0.598
ENPP7
Ectonucleotide pyrophosphatase/phosphodiesterase 7.
      
 0.548
EPS15L1
Epidermal growth factor receptor pathway substrate 15 like 1.
    
 0.527
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.496
FBXO41
F-box protein 41.
   
  
 0.486
RC3H2
Ring finger and CCCH-type domains 2.
   
 
 0.483
ROR2
Receptor tyrosine kinase like orphan receptor 2; Belongs to the protein kinase superfamily. Tyr protein kinase family. ROR subfamily.
    
 0.457
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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