STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOXL4Lysyl oxidase like 4. (256 aa)    
Predicted Functional Partners:
U3I8F7_ANAPP
Uncharacterized protein.
 
  
  0.841
U3IS20_ANAPP
Uncharacterized protein.
 
  
  0.805
U3IHW7_ANAPP
Uncharacterized protein.
 
  
  0.571
ENSAPLP00000025208
Uncharacterized protein.
    
 0.551
MFAP5
Microfibril associated protein 5.
   
 
 0.486
HOXC9
Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.
      
 0.467
CHCHD1
Coiled-coil-helix-coiled-coil-helix domain containing 1.
      
 0.431
FBLN5
Fibulin 5.
     
 0.423
ENSAPLP00000023501
SRCR domain-containing protein.
  
  
 
0.413
LOXL2
Lysyl oxidase like 2.
  
  
 
0.410
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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