STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGD4FYVE, RhoGEF and PH domain containing 4. (1113 aa)    
Predicted Functional Partners:
DNM1L
Dynamin 1 like; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
 
    
 0.732
DSP
Desmoplakin.
    
 
 0.704
YARS2
Tyrosine--tRNA ligase.
      
 0.676
PKP2
Plakophilin 2.
      
 0.632
ENSAPLP00000017477
UDENN domain-containing protein.
   
  
 0.625
SBF2
Uncharacterized protein.
   
  
 0.625
CDC42
Cell division cycle 42.
   
 0.616
SLC39A6
Solute carrier family 39 member 6.
      
 0.611
GDAP1
Ganglioside induced differentiation associated protein 1; Belongs to the GST superfamily.
      
 0.611
OSBPL11
Oxysterol-binding protein; Belongs to the OSBP family.
      
 0.542
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.