STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMGA2Uncharacterized protein. (202 aa)    
Predicted Functional Partners:
U3I670_ANAPP
RRM domain-containing protein.
   
 
 0.736
SUOX
Sulfite oxidase.
      
 0.643
HMGA1
Uncharacterized protein.
   
 
 0.637
LCORL
Ligand dependent nuclear receptor corepressor like.
      
 0.618
LIN28A
Lin-28 homolog A.
      
 0.611
LIN28B
Lin-28 homolog B.
      
 0.611
ALX1
ALX homeobox 1.
      
 0.491
NCAPG
Non-SMC condensin I complex subunit G.
      
 0.485
ANXA10
Annexin A10.
      
 0.463
U3J6U1_ANAPP
COX6C domain-containing protein.
      
 0.455
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.