STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLRN3Clarin 3. (226 aa)    
Predicted Functional Partners:
KCTD9
Potassium channel tetramerization domain containing 9.
      
 0.749
SLC5A1
Solute carrier family 5 member 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
   
  
 0.726
U3IRQ4_ANAPP
Uncharacterized protein.
   
  
 0.668
TMIGD1
Uncharacterized protein.
   
  
 0.668
SLC10A2
Solute carrier family 10 member 2.
   
  
 0.656
SLC6A19
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
   
  
 0.656
UBOX5
U-box domain containing 5.
      
 0.641
FER1L6
Fer-1 like family member 6.
      
 0.635
CRKL
CRK like proto-oncogene, adaptor protein.
    
 0.611
CRK
CRK proto-oncogene, adaptor protein.
    
 0.611
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.