STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNCAAlpha-synuclein; Belongs to the synuclein family. (200 aa)    
Predicted Functional Partners:
PRKN
Parkin RBR E3 ubiquitin protein ligase.
    
 
 0.934
SNCAIP
Synuclein alpha interacting protein.
    
 0.892
TARDBP
TAR DNA binding protein.
    
 
 0.836
HTT
Huntingtin.
   
 
 0.827
PARK7
Parkinsonism associated deglycase.
    
 
 0.827
APP
Amyloid beta precursor protein.
   
 0.823
HSPA4
Heat shock protein family A (Hsp70) member 4.
   
 
 0.810
TH
Tyrosine hydroxylase.
    
 
 0.790
ENSAPLP00000017448
Microtubule-associated protein.
   
 
 0.775
ENSAPLP00000024204
Microtubule-associated protein.
   
 
 0.775
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.