STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIVA1SIVA1 apoptosis inducing factor. (178 aa)    
Predicted Functional Partners:
BCL2L1
BCL2 like 1.
    
 0.950
BCL2
BCL2 apoptosis regulator.
    
 0.913
RAD18
RAD18 E3 ubiquitin protein ligase.
    
 
 0.696
ZBTB1
Zinc finger and BTB domain containing 1.
      
 0.611
SHPRH
SNF2 histone linker PHD RING helicase.
      
 0.603
SART3
Spliceosome associated factor 3, U4/U6 recycling protein.
      
 0.602
RAI2
Retinoic acid induced 2.
      
 0.521
CASP6
Caspase 6; Belongs to the peptidase C14A family.
      
 0.518
CLSPN
Claspin.
      
 0.475
PKIA
cAMP-dependent protein kinase inhibitor; Belongs to the PKI family.
      
 0.449
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.