STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPLP00000028891RRM domain-containing protein. (175 aa)    
Predicted Functional Partners:
ENSAPLP00000024837
Uncharacterized protein.
 
      0.899
HNRNPH1
Uncharacterized protein.
   
 0.721
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.713
UBE2I
Ubiquitin conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.686
U3J272_ANAPP
RRM domain-containing protein.
 
 
 0.681
PTBP2
Polypyrimidine tract binding protein 2.
  
0.642
PTBP3
Polypyrimidine tract binding protein 3.
  
0.637
PTBP1
Polypyrimidine tract binding protein 1.
  
0.637
LRRC47
Leucine rich repeat containing 47.
      
 0.626
MBNL3
Muscleblind like splicing regulator 3.
   
 
 0.624
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.