STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPLP00000028911Collagen IV NC1 domain-containing protein. (401 aa)    
Predicted Functional Partners:
ENSAPLP00000030645
Uncharacterized protein.
 
    
0.751
ENSAPLP00000018682
Uncharacterized protein.
  
  0.524
ENSAPLP00000029935
Uncharacterized protein.
  
     0.499
C1QB
Complement C1q B chain.
  
     0.487
COLEC10
Collectin subfamily member 10.
  
 
  0.484
C1QC
Complement C1q C chain.
  
 
0.453
ENSAPLP00000016722
Uncharacterized protein.
 
 
 0.444
COL8A1
Collagen type VIII alpha 1 chain.
  
0.443
COLEC11
Collectin subfamily member 11.
  
 
  0.402
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.