STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPLP00000029053RRM domain-containing protein. (217 aa)    
Predicted Functional Partners:
EIF4A3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
   
 0.994
ENSAPLP00000020998
NTF2 domain-containing protein.
    
 0.993
UPF3A
UPF3A regulator of nonsense mediated mRNA decay.
    
 0.986
THOC2
THO complex 2.
   
 0.970
SRRM1
Serine and arginine repetitive matrix 1.
    
 0.958
NCBP1
Nuclear cap binding protein subunit 1.
    
 0.955
RNPS1
RNA binding protein with serine rich domain 1.
   
 0.955
UPF1
UPF1 RNA helicase and ATPase.
   
 
 0.949
MAGOH
Mago homolog, exon junction complex subunit.
   
 0.933
THOC1
THO complex 1.
    
 0.926
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.