STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPLP00000029119ANK_REP_REGION domain-containing protein. (309 aa)    
Predicted Functional Partners:
ENSAPLP00000029867
ANK_REP_REGION domain-containing protein.
 
     0.906
TRPV1
Transient receptor potential cation channel subfamily V member 1; Belongs to the transient receptor (TC 1.A.4) family.
     
 0.751
RNF146
Ring finger protein 146.
    
 0.656
TRPM8
Transient receptor potential cation channel subfamily M member 8.
     
 0.627
UTP6
UTP6 small subunit processome component.
      
 0.611
AXIN1
Axin 1.
    
 0.554
AXIN2
DIX domain-containing protein.
    
 0.554
ENSAPLP00000020785
RGS domain-containing protein.
    
 0.554
ANKRD22
Ankyrin repeat domain 22.
  
 
  0.540
RFXANK
ANK_REP_REGION domain-containing protein.
  
   
 0.528
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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