STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEMA4DSemaphorin 4D; Belongs to the semaphorin family. (854 aa)    
Predicted Functional Partners:
PLXNB1
Plexin B1.
    
 0.999
PLXNB2
Plexin B2.
    
 0.900
PLXNA1
Plexin_cytopl domain-containing protein.
    
 0.839
PLXNA4
Plexin A4.
    
 0.835
PLXND1
Plexin D1.
    
0.802
PLXNC1
Plexin C1.
    
 0.792
RRAS2
RAS related 2.
    
 0.791
RND1
Rho family GTPase 1.
    
 0.755
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.738
MST1R
Macrophage stimulating 1 receptor.
    
 0.675
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.