STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSCAProstate stem cell antigen. (122 aa)    
Predicted Functional Partners:
MSLN
Uncharacterized protein.
      
 0.700
RPL22L1
Ribosomal protein L22 like 1.
   
  
 0.618
U3J6M8_ANAPP
ZP domain-containing protein.
     
 0.615
LYPD6
LY6/PLAUR domain containing 6.
   
 
 0.595
F10
Coagulation factor X.
   
  
 0.497
ENSAPLP00000022920
Peptidase S1 domain-containing protein.
   
  
 0.497
RPL22
Uncharacterized protein.
   
  
 0.457
RPS7
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
      
 0.439
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.