STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGEF3Rho guanine nucleotide exchange factor 3. (673 aa)    
Predicted Functional Partners:
TBC1D9B
TBC1 domain family member 9B.
      
 0.885
RHOA
Ras homolog family member A.
    
 0.625
RHOC
Uncharacterized protein.
    
 0.625
RHOB
Ras homolog family member B.
    
 0.625
RND1
Rho family GTPase 1.
    
 0.584
RND3
Rho family GTPase 3.
    
 0.584
RHOF
Ras homolog family member F, filopodia associated.
    
 0.576
WASL
WASP like actin nucleation promoting factor.
    
 0.518
ITSN2
Uncharacterized protein.
    
0.508
ENSAPLP00000028515
Uncharacterized protein.
    
 0.505
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.