STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMGN1High mobility group nucleosome binding domain 1. (92 aa)    
Predicted Functional Partners:
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.988
RPL26
Ribosomal protein L26.
  
 0.925
RPL35
Ribosomal protein L35.
  
 0.920
RPL23
Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
  
 0.920
RPL5
Ribosomal_L18_c domain-containing protein.
  
 0.920
RPL11
Ribosomal protein L11.
  
 0.920
U3ILL9_ANAPP
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
  
 0.916
MRPL13
Mitochondrial ribosomal protein L13.
  
 0.916
RPL32
Uncharacterized protein.
   
 0.913
RPL8
Ribosomal protein L8.
  
 0.911
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.