STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCFD2Sec1 family domain containing 2; Belongs to the STXBP/unc-18/SEC1 family. (648 aa)    
Predicted Functional Partners:
ZW10
Zw10 kinetochore protein.
    
 
 0.800
RINT1
RAD50 interactor 1.
   
 
 0.772
NBAS
Neuroblastoma amplified sequence.
    
 
 0.770
STX18
Syntaxin 18.
    
 
 0.767
LNX1
Ligand of numb-protein X 1.
      
 0.748
SCFD1
Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.598
GSX2
GS homeobox 2.
      
 0.586
NAPG
NSF attachment protein gamma.
    
   0.517
USE1-2
Uncharacterized protein.
   
   0.513
USE1
Unconventional SNARE in the ER 1.
   
   0.513
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.