STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RFX8RFX family member 8, lacking RFX DNA binding domain. (538 aa)    
Predicted Functional Partners:
ZMYM3
Zinc finger MYM-type containing 3.
      
 0.673
U3IRD7_ANAPP
Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient.
    
 
 0.672
ENSAPLP00000025719
RFX-type winged-helix domain-containing protein.
  
 
 
 0.657
LLPH
LLP homolog, long-term synaptic facilitation factor.
      
 0.639
PIGQ
Uncharacterized protein.
      
 0.634
KCNRG
Potassium channel regulator.
      
 0.611
ACSS3
Acyl-CoA synthetase short chain family member 3.
      
 0.610
THOC1
THO complex 1.
      
 0.586
DOCK10
Dedicator of cytokinesis 10; Belongs to the DOCK family.
      
 0.546
ASIC2
Acid sensing ion channel subunit 2; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
    
 
 0.545
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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