STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPLP00000029835LSDAT_euk domain-containing protein. (129 aa)    
Predicted Functional Partners:
TRPM1
Uncharacterized protein.
 
      0.900
NYX
Nyctalopin.
      
 0.619
ENSAPLP00000020040
LRRCT domain-containing protein.
      
 0.610
ELFN1
Extracellular leucine rich repeat and fibronectin type III domain containing 1.
      
 0.543
ENSAPLP00000021951
RGS_DHEX domain-containing protein.
      
 0.478
RGS11
RGS domain-containing protein.
      
 0.478
ENSAPLP00000030808
RGS_DHEX domain-containing protein.
      
 0.478
PKD2L2
Polycystin 2 like 2, transient receptor potential cation channel.
      
 0.459
CABP4
Calcium binding protein 4.
      
 0.459
LRIT3
Leucine rich repeat, Ig-like and transmembrane domains 3.
      
 0.459
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.