STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPR88G protein-coupled receptor 88. (295 aa)    
Predicted Functional Partners:
VCAM1
Uncharacterized protein.
 
  
 0.631
RTCA
RNA 3'-terminal phosphate cyclase.
      
 0.611
GPR135
G protein-coupled receptor 135; Belongs to the G-protein coupled receptor 1 family.
      
 0.611
DPH5
Diphthamide biosynthesis 5.
      
 0.609
LRRC2
Leucine rich repeat containing 2.
     
 0.499
LRRC39
Leucine rich repeat containing 39.
     
 0.499
GPR161
G protein-coupled receptor 161; Belongs to the G-protein coupled receptor 1 family.
   
  
 0.489
GPR63
G protein-coupled receptor 63.
      
 0.487
GPR6
G protein-coupled receptor 6; Belongs to the G-protein coupled receptor 1 family.
   
  
 0.486
GNB1
G protein subunit beta 1.
    
  0.476
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.