ENSAPLP00000029949 protein (Anas platyrhynchos)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSAPLP00000029949

Uncharacterized protein. (829 aa)

Predicted Functional Partners:

AKAP1

0.622

KCNMB4

0.611

ASMTL

0.605

PDZK1

0.586

U3J4V3_ANAPP

0.477

RAMP1

0.458

TSN

0.428

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKAP1	ENSAPLP00000029949	ENSAPLP00000014357	ENSAPLP00000029949	A-kinase anchoring protein 1.	Uncharacterized protein.	0.622
AKAP1	PDZK1	ENSAPLP00000014357	ENSAPLP00000030749	A-kinase anchoring protein 1.	PDZ domain containing 1.	0.610
AKAP1	U3J4V3_ANAPP	ENSAPLP00000014357	ENSAPLP00000014530	A-kinase anchoring protein 1.	Homeobox domain-containing protein.	0.545
ASMTL	ENSAPLP00000029949	ENSAPLP00000009589	ENSAPLP00000029949	Acetylserotonin O-methyltransferase like.	Uncharacterized protein.	0.605
ENSAPLP00000029949	AKAP1	ENSAPLP00000029949	ENSAPLP00000014357	Uncharacterized protein.	A-kinase anchoring protein 1.	0.622
ENSAPLP00000029949	ASMTL	ENSAPLP00000029949	ENSAPLP00000009589	Uncharacterized protein.	Acetylserotonin O-methyltransferase like.	0.605
ENSAPLP00000029949	KCNMB4	ENSAPLP00000029949	ENSAPLP00000013188	Uncharacterized protein.	Potassium calcium-activated channel subfamily M regulatory beta subunit 4.	0.611
ENSAPLP00000029949	PDZK1	ENSAPLP00000029949	ENSAPLP00000030749	Uncharacterized protein.	PDZ domain containing 1.	0.586
ENSAPLP00000029949	RAMP1	ENSAPLP00000029949	ENSAPLP00000003872	Uncharacterized protein.	Receptor activity modifying protein 1.	0.458
ENSAPLP00000029949	TSN	ENSAPLP00000029949	ENSAPLP00000021396	Uncharacterized protein.	Translin.	0.428
ENSAPLP00000029949	U3J4V3_ANAPP	ENSAPLP00000029949	ENSAPLP00000014530	Uncharacterized protein.	Homeobox domain-containing protein.	0.477
KCNMB4	ENSAPLP00000029949	ENSAPLP00000013188	ENSAPLP00000029949	Potassium calcium-activated channel subfamily M regulatory beta subunit 4.	Uncharacterized protein.	0.611
PDZK1	AKAP1	ENSAPLP00000030749	ENSAPLP00000014357	PDZ domain containing 1.	A-kinase anchoring protein 1.	0.610
PDZK1	ENSAPLP00000029949	ENSAPLP00000030749	ENSAPLP00000029949	PDZ domain containing 1.	Uncharacterized protein.	0.586
RAMP1	ENSAPLP00000029949	ENSAPLP00000003872	ENSAPLP00000029949	Receptor activity modifying protein 1.	Uncharacterized protein.	0.458
TSN	ENSAPLP00000029949	ENSAPLP00000021396	ENSAPLP00000029949	Translin.	Uncharacterized protein.	0.428
U3J4V3_ANAPP	AKAP1	ENSAPLP00000014530	ENSAPLP00000014357	Homeobox domain-containing protein.	A-kinase anchoring protein 1.	0.545
U3J4V3_ANAPP	ENSAPLP00000029949	ENSAPLP00000014530	ENSAPLP00000029949	Homeobox domain-containing protein.	Uncharacterized protein.	0.477