STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTCD3Pentatricopeptide repeat domain 3. (684 aa)    
Predicted Functional Partners:
MRPS22
Mitochondrial ribosomal protein S22.
   
 0.991
MRPS35
Mitochondrial ribosomal protein S35.
    
 0.991
MRPS31
Mitochondrial ribosomal protein S31.
    
 0.989
MRPS14
Mitochondrial ribosomal protein S14.
    
 0.984
ENSAPLP00000018619
Uncharacterized protein.
   
 0.982
MRPS9
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
 0.979
MRPS27
Mitochondrial ribosomal protein S27.
   
 0.978
CHCHD1
Coiled-coil-helix-coiled-coil-helix domain containing 1.
    
 0.975
MRPS23
Mitochondrial ribosomal protein S23.
    
 0.975
MRPS11
Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
    
 0.974
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.