STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHISA8Uncharacterized protein. (183 aa)    
Predicted Functional Partners:
SHISA6
Uncharacterized protein.
 
      0.842
MN1
MN1 proto-oncogene, transcriptional regulator.
      
 0.747
PRDM6
PR/SET domain 6.
      
 0.627
SHISAL2A
Shisa like 2A.
      
 0.626
BEND2
Uncharacterized protein.
      
 0.611
SHISA2
Shisa family member 2.
      
 0.586
APCDD1L
APC down-regulated 1 like.
      
 0.545
SNTN
Sentan, cilia apical structure protein.
      
 0.514
VOPP1
VOPP1 WW domain binding protein.
      
 0.471
CDHR3
Uncharacterized protein.
      
 0.470
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.