STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPLP00000030049IBB domain-containing protein. (110 aa)    
Predicted Functional Partners:
KPNB1
Karyopherin subunit beta 1.
   
 0.767
CSE1L
Chromosome segregation 1 like.
   
 
 0.622
NCBP1
Nuclear cap binding protein subunit 1.
   
 
 0.584
YARS1
Tyrosine--tRNA ligase.
   
  
 0.533
ALS2
Alsin Rho guanine nucleotide exchange factor ALS2.
   
 
 0.526
EXOSC10
Exosome component 10.
    
 
 0.522
U3IPR8_ANAPP
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
    
   0.522
ZNF511
Zinc finger protein 511.
    
   0.520
NUP50
Nucleoporin 50.
   
 
 0.492
LRGUK
Uncharacterized protein.
   
 
 0.430
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.