STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPLP00000030138CA domain-containing protein. (179 aa)    
Predicted Functional Partners:
ENSAPLP00000020509
Uncharacterized protein.
 
 
   0.924
ENSAPLP00000019197
Uncharacterized protein.
 
  
   0.857
FJX1
Four-jointed box kinase 1.
   
 
 0.662
ENSAPLP00000017190
Uncharacterized protein.
 
   
0.593
CTNNB1
Catenin beta 1.
    
 0.561
JUP
Junction plakoglobin.
    
 0.561
ENSAPLP00000019183
Uncharacterized protein.
 
    
0.539
LCMT1
Leucine carboxyl methyltransferase 1.
      
 0.487
ENSAPLP00000027544
Uncharacterized protein.
 
   
0.455
PCDH15
Protocadherin related 15.
   
0.422
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.