STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLCEGlucuronic acid epimerase. (606 aa)    
Predicted Functional Partners:
HS2ST1
Uncharacterized protein.
   
 
 0.621
CHST13
Carbohydrate sulfotransferase.
      
 0.611
PAQR5
Uncharacterized protein.
      
 0.598
GPM6A
Glycoprotein M6A.
      
 0.557
SMARCA2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2.
      
 0.549
COL18A1
Collagen type XVIII alpha 1 chain.
      
 0.541
FIGNL1
Fidgetin like 1; Belongs to the AAA ATPase family.
      
 0.539
SDC2
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 0.531
EXTL3
Exostosin like glycosyltransferase 3; Belongs to the glycosyltransferase 47 family.
      
 0.493
NDST2
Uncharacterized protein.
   
 
 0.489
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.