STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPLP00000030344Uncharacterized protein. (140 aa)    
Predicted Functional Partners:
U3HZW4_ANAPP
Uncharacterized protein.
   
  
 0.563
U3I075_ANAPP
Kazal-like domain-containing protein.
   
  
 0.490
OLFML1
Olfactomedin like 1.
      
 0.480
C17orf67
Chromosome 17 open reading frame 67.
      
 0.479
MELTF
Ovotransferrin; Belongs to the transferrin family.
      
 0.450
TF
Ovotransferrin; Belongs to the transferrin family.
      
 0.450
MAU2
MAU2 sister chromatid cohesion factor.
      
 0.445
FAM180A
Family with sequence similarity 180 member A.
      
 0.439
U3J0P7_ANAPP
SCP domain-containing protein; Belongs to the CRISP family.
      
 0.439
EIF3L
Eukaryotic translation initiation factor 3 subunit L; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
      
 0.439
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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