STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPRFProtein tyrosine phosphatase receptor type F. (1951 aa)    
Predicted Functional Partners:
NTRK3
Tyrosine-protein kinase receptor.
    
 0.822
ENSAPLP00000018903
Uncharacterized protein.
    
 0.760
ADGRV1
Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family.
   
  
 0.720
SLITRK2
SLIT and NTRK like family member 2.
    
 0.713
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
   
 0.690
PPFIA4
PTPRF interacting protein alpha 4.
    
 0.687
ENSAPLP00000026777
Tyrosine-protein kinase receptor.
    
 0.679
NTRK2
Tyrosine-protein kinase receptor.
    
 0.679
AP4E1
Adaptor related protein complex 4 subunit epsilon 1.
     
 0.661
IL1RAPL1
Interleukin 1 receptor accessory protein like 1.
    
 0.654
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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