STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IRF4Interferon regulatory factor 4. (446 aa)    
Predicted Functional Partners:
BATF
Basic leucine zipper ATF-like transcription factor.
   
 0.640
BCL6
Uncharacterized protein.
    
 0.638
XBP1
X-box binding protein 1.
      
 0.525
CD4
Ig-like domain-containing protein.
   
 
 0.520
BATF3
Basic leucine zipper ATF-like transcription factor 3.
   
 0.519
PAX5
Paired box 5.
   
  
 0.499
STAT3
Signal transducer and activator of transcription.
   
 0.479
SLC24A4
Solute carrier family 24 member 4; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
     
 0.479
IRF1
Interferon regulatory factor 1.
   
0.467
AICDA
Activation induced cytidine deaminase.
   
  
 0.462
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.