ENSAPLP00000030646 protein (Anas platyrhynchos)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSAPLP00000030646

Uncharacterized protein. (132 aa)

Predicted Functional Partners:

RIMS2

0.626

ENSAPLP00000029757

0.626

SLC32A1

0.471

U3J0K7_ANAPP

0.471

ABAT

0.456

U3IQ65_ANAPP

0.427

GLUD1

0.427

SDHA

0.409

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABAT	ENSAPLP00000030646	ENSAPLP00000012125	ENSAPLP00000030646	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Uncharacterized protein.	0.456
ABAT	GLUD1	ENSAPLP00000012125	ENSAPLP00000013342	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	ELFV_dehydrog domain-containing protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.643
ABAT	U3IQ65_ANAPP	ENSAPLP00000012125	ENSAPLP00000009388	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	ELFV_dehydrog domain-containing protein.	0.643
ENSAPLP00000029757	ENSAPLP00000030646	ENSAPLP00000029757	ENSAPLP00000030646	Uncharacterized protein.	Uncharacterized protein.	0.626
ENSAPLP00000029757	RIMS2	ENSAPLP00000029757	ENSAPLP00000019733	Uncharacterized protein.	C2 domain-containing protein.	0.931
ENSAPLP00000029757	SLC32A1	ENSAPLP00000029757	ENSAPLP00000006698	Uncharacterized protein.	Solute carrier family 32 member 1.	0.903
ENSAPLP00000029757	U3J0K7_ANAPP	ENSAPLP00000029757	ENSAPLP00000013034	Uncharacterized protein.	Aa_trans domain-containing protein.	0.903
ENSAPLP00000030646	ABAT	ENSAPLP00000030646	ENSAPLP00000012125	Uncharacterized protein.	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.456
ENSAPLP00000030646	ENSAPLP00000029757	ENSAPLP00000030646	ENSAPLP00000029757	Uncharacterized protein.	Uncharacterized protein.	0.626
ENSAPLP00000030646	GLUD1	ENSAPLP00000030646	ENSAPLP00000013342	Uncharacterized protein.	ELFV_dehydrog domain-containing protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.427
ENSAPLP00000030646	RIMS2	ENSAPLP00000030646	ENSAPLP00000019733	Uncharacterized protein.	C2 domain-containing protein.	0.626
ENSAPLP00000030646	SDHA	ENSAPLP00000030646	ENSAPLP00000006678	Uncharacterized protein.	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).	0.409
ENSAPLP00000030646	SLC32A1	ENSAPLP00000030646	ENSAPLP00000006698	Uncharacterized protein.	Solute carrier family 32 member 1.	0.471
ENSAPLP00000030646	U3IQ65_ANAPP	ENSAPLP00000030646	ENSAPLP00000009388	Uncharacterized protein.	ELFV_dehydrog domain-containing protein.	0.427
ENSAPLP00000030646	U3J0K7_ANAPP	ENSAPLP00000030646	ENSAPLP00000013034	Uncharacterized protein.	Aa_trans domain-containing protein.	0.471
GLUD1	ABAT	ENSAPLP00000013342	ENSAPLP00000012125	ELFV_dehydrog domain-containing protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.643
GLUD1	ENSAPLP00000030646	ENSAPLP00000013342	ENSAPLP00000030646	ELFV_dehydrog domain-containing protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	Uncharacterized protein.	0.427
GLUD1	SDHA	ENSAPLP00000013342	ENSAPLP00000006678	ELFV_dehydrog domain-containing protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).	0.550
RIMS2	ENSAPLP00000029757	ENSAPLP00000019733	ENSAPLP00000029757	C2 domain-containing protein.	Uncharacterized protein.	0.931
RIMS2	ENSAPLP00000030646	ENSAPLP00000019733	ENSAPLP00000030646	C2 domain-containing protein.	Uncharacterized protein.	0.626